eCyte Joins UCSD Microbiome Innovation Center as Core Industry Partner

26 Mar 2026
SAN DIEGO, CALIFORNIA – eCyte has been named a Core Industry Partner at the University of California San Diego (UCSD) Center for Microbiome Innovation (CMI). The partnership brings eCyte’s label-free single-cell metabolic phenotyping and sorting technologies to one of the world’s leading microbiome research institutes, supporting functional analysis and translational applications in complex microbial communities.

As part of the collaboration, eCyte has deployed its Raman-Activated Microfluidic Sorter (RAMS) at CMI’s laboratory in Franklin Antonio Hall. The system enables rapid, non-destructive functional analysis and sorting of microorganisms at single-cell resolution, providing a powerful tool for functional screening and multi-omics research.

Additionally, eCyte is working with CMI to co-develop a demonstration node for iMAPS (in situ Metabolic Atlas by Precision Single-cell Sorting), an international initiative announced at the 2026 CMI International Microbiome Meeting. This collaboration highlights the growing role of single-cell Raman technology in advancing microbiome research.

Dr. Andrew Bartko, Executive Director of CMI, noted: “eCyte’s technology addresses a core challenge in microbiome research: label-free functional analysis of complex communities. This partnership supports our mission to enable the discovery of functional microorganisms for human health and environmental applications.”

A representative from eCyte added: “Joining UCSD CMI aligns with our commitment to advancing single-cell Raman technologies in complex biological systems. We look forward to supporting UCSD’s research efforts.”

Through this partnership, eCyte continues to expand its global presence, providing advanced single-cell functional sorting technologies to support innovation in microbiome science, synthetic biology, and related fields.

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